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All mechanisms

Persistent virus / viral reservoir

SARS-CoV-2 antigen or genetic material persisting in tissue reservoirs months after the acute infection.

There is growing biological evidence that viral antigen or RNA can persist in tissue reservoirs for months — circulating spike/nucleocapsid is detectable in a substantial minority of patients on ultra-sensitive (Simoa) assays. Crucially, this is biologically plausible but therapeutically unproven: the best antiviral trials for established Long COVID (Paxlovid in STOP-PASC, PAX-LC, and RECOVER-VITAL) were all null. The most plausible path forward is antigen-enriched subgroup trials, not any currently available 'antiviral protocol.' Be wary of high harm-to-evidence options like off-label high-dose herpesvirus antivirals.

How it's tested

Ultra-sensitive antigen assay (Simoa)

$200–$1,500Mostly research-only

Single-molecule detection of circulating spike/nucleocapsid antigen months after infection — the leading research biomarker of a viral reservoir. Not yet a validated clinical test.

PCR (saliva / stool / blood)

$100–$3,000Specialist referral

Tests for residual viral genetic material in body fluids.

Treatment options & their evidence

Graded honestly — including treatments that failed in good trials, which is worth knowing.

Paxlovid (nirmatrelvir-ritonavir) for established LC

Failed in trialsCautionpromise 0 · 3 RCTs

Three RCTs (STOP-PASC, PAX-LC, RECOVER-VITAL), including extended courses, were all null for established Long COVID. Not justified outside trials.

Caution: Strong CYP3A drug interactions via ritonavir (statins, anticoagulants, many others).